Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932590.1_cds_XP_016479056.1_70635
CDS Infomation

[gene=LOC107800406] [db_xref=GeneID:107800406] [protein=cyprosin-like isoform X2] [protein_id=XP_016479056.1] [location=complement(join(72915..72999,73106..73191,73559..73675,74554..74784,75081..75194,75282..75346,75608..75647,75750..75918,76239..76300,76427..76521,76623..76683,76760..77126,77802..77938))] [gbkey=CDS]
Sequence

ATGATGACTGTTGATCACGCTTCTGAGTTTCTGCCTACATATAAAAACACCCTTTATATA
CTTTGGGATTTTTCATCTGTTTCCTTGCCTTATTGGTTATTTGCATTATCCCTGGAGTTT
TTTTTGCTTTCACTAAGAGCTCAAGAACTTGTGGACAGCATGGGAATCAAACTTTTACTT
GCAGCATTACTAATATGGGATTTCATAACCTGTGCTTTTGGCTTCAATGTATCTGCTGAT
AATATGATAAGGATTGGATTAAAGCGACGACCTTTGGATCTTTATAGCGTAAAAAGTGCA
AGAATCTATGCTAAAGATCATCATAAAAAAGGTTCAAATAGGAACTTTGCTGCACTTAAA
GATGAAATAGTTTATCTGAAGAACTACATGGACGTTCAGTATTTCGCAGAGATTGGTATA
GGTTCACCTCCTCAGAACTTTGCTGTTGTGTTTGATACTGGTAGTTCCAATCTTTGGGTC
CCGTCTTCAAAATGTATCTTCTCTATTGCTTGTTATCTTCGTTCGAGATACAGATCAAGA
CTATCCACTACATACACAAAAATTGGAAAATCTTGCAAAATCCCTTTTGGAACAAGATCA
GTGCGCGGATTTTTCAGCCAAGACAATACTAAAGTTGGGAATGCTGTTATAAAGCAGCAG
TATGATGGAGTACTAGGACTAGGATTTCAGGATGCTGCTGCAGGACGAGTAACGCCAGTA
TGGTACAATATGTTGCTTCAGAGTATAGTTACTAAGCCAATCTTCTCGTTTTGGTTAAAT
CGAGATCCTAAATCTATTTTGGGGGGTGAAATTCTCTTTGGAGGTGTCGATTCGACACAC
TTCAGAGGTCAACATACTTATGTTCCTGTCGCTCAAAATGGTTACTGGGAGATTGAAATA
GGTGATCTTTTTATTGGTAACAATTCAACAGGTCTTTGCAGAGGTGGTTGTCCGGCTATT
GTGGATACGGGAACGTCTTTTCTAGCTGGTCCGACTACTATTTTGACTCAAATAAATCAT
GCTATTGGAGCAGAAGGAATTGTTAGTATGGAATGTAAAACTGTTTTCTCAAATTATGGG
AATTTGATTTGGGAAAACTTAATATCAGGGTTACAACCTGAAAGAATTTGCCACATAATT
GGCCTCTGTAAACATAACGTCTCGTTCGATGAAAATGTACACAGCCACGAGCAGAAAATG
GTGGTTAGAAGTTCAAAATTGGAGAAGCTACCAAATGATGAGAGTGCTTTATGTTCTTTC
TGTGAGATGACAGTTTTCTGGATGCAAGTAGAATTTAGAAAAGAGAGAACAAAGGAAAAA
GCATTTGAATATGTTAATCAGCTGTGTGAGAAGCTTCCTGATCCGAGAGGAAAATCGTTT
ATCAACTGCGACGTCTTTTCCTTGCCACATATTACAATTACAATTGGGAATAAATCTTTC
CCTCTTTCTCCAGATCAATATGTTATCAGAATCGAAAATAATCACGGTGCTCACTGTGTT
AGTGGATTTACAGCTTTGGATGTGCATCCACGACGTCCCCTCTGGGTACTTGGAGATGTA
TTCTTGAGAGCATATCACACTGTTTTTGACTTTGGTAATCTACAAGTTGGATTCGCGGAA
AGTGCTTAG

Peptide Sequence

PEP ID

XP_016479056.1
PEP Infomation

PREDICTED: cyprosin-like isoform X2 [Nicotiana tabacum]
Sequence

MMTVDHASEFLPTYKNTLYILWDFSSVSLPYWLFALSLEFFLLSLRAQELVDSMGIKLLL
AALLIWDFITCAFGFNVSADNMIRIGLKRRPLDLYSVKSARIYAKDHHKKGSNRNFAALK
DEIVYLKNYMDVQYFAEIGIGSPPQNFAVVFDTGSSNLWVPSSKCIFSIACYLRSRYRSR
LSTTYTKIGKSCKIPFGTRSVRGFFSQDNTKVGNAVIKQQYDGVLGLGFQDAAAGRVTPV
WYNMLLQSIVTKPIFSFWLNRDPKSILGGEILFGGVDSTHFRGQHTYVPVAQNGYWEIEI
GDLFIGNNSTGLCRGGCPAIVDTGTSFLAGPTTILTQINHAIGAEGIVSMECKTVFSNYG
NLIWENLISGLQPERICHIIGLCKHNVSFDENVHSHEQKMVVRSSKLEKLPNDESALCSF
CEMTVFWMQVEFRKERTKEKAFEYVNQLCEKLPDPRGKSFINCDVFSLPHITITIGNKSF
PLSPDQYVIRIENNHGAHCVSGFTALDVHPRRPLWVLGDVFLRAYHTVFDFGNLQVGFAE
SA

Transcript Sequence

Gene sequence data has not been registered.